Issue
EPL
Volume 77, Number 3, February 2007
Article Number 38001
Number of page(s) 6
Section Interdisciplinary Physics and Related Areas of Science and Technology
DOI http://dx.doi.org/10.1209/0295-5075/77/38001
Published online 22 January 2007
EPL, 77 (2007) 38001
DOI: 10.1209/0295-5075/77/38001

Out-of-equilibrium competitive dynamics of quasispecies

J. Aguirre1, 2 and S. C. Manrubia1

1  Centro de Astrobiología, CSIC-INTA - Ctra. de Ajalvir km. 4, 28850 Torrejón de Ardoz, Madrid, Spain
2  Departamento de Ciencias de la Naturaleza y Física Aplicada, Universidad Rey Juan Carlos - c/ Tulipán s/n 28933 Móstoles, Madrid, Spain


received 28 July 2006; accepted in final form 27 November 2006; published February 2007
published online 22 January 2007

Abstract
The composition of a quasispecies is completely characterized, in the large population and long time limit, by the matrix yielding the transition probabilities between different types in the population. Further, its asymptotic growth rate -i.e. the largest eigenvalue of the transition matrix- completely determines the winning population in an equilibrium competition. However, due to the intrinsically heterogeneous nature of quasispecies, out-of-equilibrium fluctuations in population size might change the expected fate of competition experiments. Using a simple model for a heterogeneous population we quantify the probability that, after a population bottleneck, the a priori weaker competitor wins in a competition with a population characterized by a larger asymptotic growth rate. We analyse the role played by different degrees of neutrality in the outcome of the process, and demonstrate that lower neutrality favours the weaker competitor in out-of-equilibrium situations. Our results might shed light on empirical observations in competition experiments with RNA viruses.

PACS
87.10.+e - General theory and mathematical aspects.
87.23.Kg - Dynamics of evolution .
89.90.+n - Other topics in areas of applied and interdisciplinary physics.

© Europhysics Letters Association 2007